Difference between revisions of "MutTA"
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=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30630&redirect=T BSU30630] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ytkD.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ytkD.html] | ||
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=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30630&redirect=T BSU30630] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=4JZV 4JZV] {{PubMed|23610407}} | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=4JZV 4JZV] {{PubMed|23610407}} |
Revision as of 14:35, 2 April 2014
- Description: error prevention oxidized guanine system, confers protection against oxidative stress to vegetative cells, moreover the protein has RNA pyrophosphohydrolase activity
Gene name | mutTA |
Synonyms | ytkD, rppH |
Essential | no |
Product | 8-oxo-dGTPase (antimutator), RNA pyrophosphohydrolase |
Function | DNA repair, RNA degradation |
Gene expression levels in SubtiExpress: mutTA | |
MW, pI | 18 kDa, 5.952 |
Gene length, protein length | 474 bp, 158 aa |
Immediate neighbours | ytlD, ytkC |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
DNA repair/ recombination, sporulation proteins, RNases
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU30630
Phenotypes of a mutant
Database entries
- BsubCyc: BSU30630
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- removal of pyrophosphate from the 5' end of mRNAs to make the RNA accessible for degradation by RNases PubMed
- RppH requires at least two unpaired nucleotides at the 5' end of its RNA substrates and prefers three or more. The second of these 5'-terminal nucleotides must be G, whereas a less strict preference for a purine is evident at the third position, and A is slightly favored over G at the first position PubMed
- Protein family: Nudix hydrolase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU30630
- UniProt: O35013
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications