Difference between revisions of "YraF"

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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
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* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:''' spore wall (according to Swiss-Prot)
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* '''[[Localization]]:'''
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** spore wall (according to Swiss-Prot)
  
 
=== Database entries ===
 
=== Database entries ===
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=Expression and regulation=
 
=Expression and regulation=
 
 
 
* '''Operon:''' ''[[yraG]]-[[yraF]]-[[adhB]]-[[yraE]]-[[yraD]]'' {{PubMed|16497325}}
 
* '''Operon:''' ''[[yraG]]-[[yraF]]-[[adhB]]-[[yraE]]-[[yraD]]'' {{PubMed|16497325}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yraF_2753065_2753433_1 yraF] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yraF_2753065_2753433_1 yraF] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigG]] {{PubMed|16497325}}
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* '''[[Sigma factor]]:''' [[SigG]] {{PubMed|16497325}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 20:15, 16 February 2014

  • Description: forespore-specific sporulation protein, similar to spore coat protein

Gene name yraF
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yraF
MW, pI 13 kDa, 5.139
Gene length, protein length 366 bp, 122 aa
Immediate neighbours yraG, adhB
Sequences Protein DNA DNA_with_flanks
Genetic context
YraF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YraF expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU26960

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: cotF family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References