Difference between revisions of "ParC"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU18100&redirect=T BSU18100] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/parEC.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/parEC.html] | ||
| Line 100: | Line 101: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU18100&redirect=T BSU18100] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1WP5 1WP5] (C-terminal domain, Geobacillus stearothermophilus) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1WP5 1WP5] (C-terminal domain, Geobacillus stearothermophilus) | ||
Revision as of 13:51, 2 April 2014
- Description: subunit of DNA topoisomerase IV
| Gene name | parC |
| Synonyms | grlA |
| Essential | yes PubMed |
| Product | subunit of DNA topoisomerase IV |
| Function | chromosome segregation and compaction |
| Gene expression levels in SubtiExpress: parC | |
| MW, pI | 91 kDa, 6.307 |
| Gene length, protein length | 2418 bp, 806 aa |
| Immediate neighbours | parE, ynfC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
DNA condensation/ segregation, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18100
Phenotypes of a mutant
essential PubMed
Database entries
- BsubCyc: BSU18100
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: topoisomerase gyrA/parC subunit family (according to Swiss-Prot)
- Paralogous protein(s): GyrA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU18100
- Structure: 1WP5 (C-terminal domain, Geobacillus stearothermophilus)
- UniProt: Q45066
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Jean-Christophe Meile, Ling Juan Wu, S Dusko Ehrlich, Jeff Errington, Philippe Noirot
Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory.
Proteomics: 2006, 6(7);2135-46
[PubMed:16479537]
[WorldCat.org]
[DOI]
(P p)
Serkalem Tadesse, Judita Mascarenhas, Bernd Kösters, Andrej Hasilik, Peter L Graumann
Genetic interaction of the SMC complex with topoisomerase IV in Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 11);3729-3737
[PubMed:16272394]
[WorldCat.org]
[DOI]
(P p)
Nora Au, Elke Kuester-Schoeck, Veena Mandava, Laura E Bothwell, Susan P Canny, Karen Chachu, Sierra A Colavito, Shakierah N Fuller, Eli S Groban, Laura A Hensley, Theresa C O'Brien, Amish Shah, Jessica T Tierney, Louise L Tomm, Thomas M O'Gara, Alexi I Goranov, Alan D Grossman, Charles M Lovett
Genetic composition of the Bacillus subtilis SOS system.
J Bacteriol: 2005, 187(22);7655-66
[PubMed:16267290]
[WorldCat.org]
[DOI]
(P p)
Tung-Ju Hsieh, Lynn Farh, Wai Mun Huang, Nei-Li Chan
Structure of the topoisomerase IV C-terminal domain: a broken beta-propeller implies a role as geometry facilitator in catalysis.
J Biol Chem: 2004, 279(53);55587-93
[PubMed:15466871]
[WorldCat.org]
[DOI]
(P p)
W M Huang, J L Libbey, P van der Hoeven, S X Yu
Bipolar localization of Bacillus subtilis topoisomerase IV, an enzyme required for chromosome segregation.
Proc Natl Acad Sci U S A: 1998, 95(8);4652-7
[PubMed:9539793]
[WorldCat.org]
[DOI]
(P p)
