Difference between revisions of "RodZ"
Line 8: | Line 8: | ||
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''ymfM '' | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''ymfM '' | ||
|- | |- | ||
− | |style="background:#ABCDEF;" align="center"| '''Essential''' || | + | |style="background:#ABCDEF;" align="center"| '''Essential''' || may be essential {{PubMed|23879732}} |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || morphogenic protein | |style="background:#ABCDEF;" align="center"| '''Product''' || morphogenic protein | ||
Line 37: | Line 37: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
− | + | <br/><br/> | |
− | |||
− | |||
− | |||
− | |||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
Line 57: | Line 53: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
+ | * may be essential {{PubMed|23879732}} | ||
=== Database entries === | === Database entries === | ||
Line 143: | Line 140: | ||
=References= | =References= | ||
− | <pubmed>19164570, 21636744,21636745</pubmed> | + | <pubmed>19164570, 21636744,21636745 23879732</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 11:48, 26 July 2013
- Description: required for cell shape determination
Gene name | rodZ |
Synonyms | ymfM |
Essential | may be essential PubMed |
Product | morphogenic protein |
Function | required for cell shape determination |
Gene expression levels in SubtiExpress: rodZ | |
MW, pI | 23 kDa, 4.679 |
Gene length, protein length | 639 bp, 213 aa |
Immediate neighbours | ymfK/2, pgsA |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16910
Phenotypes of a mutant
- may be essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- part of the cell wall biosynthetic complex PubMed
- Localization: membrane protein (according to Swiss Prot)
Database entries
- Structure:
- UniProt: O31771
- KEGG entry: [2]
- E.C. number:
Additional information
overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ ) PubMed
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Adriano Henriques, Lisbon, Portugal homepage
Your additional remarks
References
Katarína Muchová, Zuzana Chromiková, Imrich Barák
Control of Bacillus subtilis cell shape by RodZ.
Environ Microbiol: 2013, 15(12);3259-71
[PubMed:23879732]
[WorldCat.org]
[DOI]
(I p)
Ethan C Garner, Remi Bernard, Wenqin Wang, Xiaowei Zhuang, David Z Rudner, Tim Mitchison
Coupled, circumferential motions of the cell wall synthesis machinery and MreB filaments in B. subtilis.
Science: 2011, 333(6039);222-5
[PubMed:21636745]
[WorldCat.org]
[DOI]
(I p)
Julia Domínguez-Escobar, Arnaud Chastanet, Alvaro H Crevenna, Vincent Fromion, Roland Wedlich-Söldner, Rut Carballido-López
Processive movement of MreB-associated cell wall biosynthetic complexes in bacteria.
Science: 2011, 333(6039);225-8
[PubMed:21636744]
[WorldCat.org]
[DOI]
(I p)
S Anisah Alyahya, Roger Alexander, Teresa Costa, Adriano O Henriques, Thierry Emonet, Christine Jacobs-Wagner
RodZ, a component of the bacterial core morphogenic apparatus.
Proc Natl Acad Sci U S A: 2009, 106(4);1239-44
[PubMed:19164570]
[WorldCat.org]
[DOI]
(I p)