Difference between revisions of "YkaA"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU12850&redirect=T BSU12850]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ykaA-pit.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ykaA-pit.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU12850&redirect=T BSU12850]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 13:30, 2 April 2014

  • Description: unknown

Gene name ykaA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ykaA
MW, pI 23 kDa, 4.905
Gene length, protein length 615 bp, 205 aa
Immediate neighbours pit, steT
Sequences Protein DNA DNA_with_flanks
Genetic context
YkaA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkaA expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

Spo0A regulon

The gene

Basic information

  • Locus tag: BSU12850

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0111 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Virginie Molle, Masaya Fujita, Shane T Jensen, Patrick Eichenberger, José E González-Pastor, Jun S Liu, Richard Losick
The Spo0A regulon of Bacillus subtilis.
Mol Microbiol: 2003, 50(5);1683-701
[PubMed:14651647] [WorldCat.org] [DOI] (P p)