Difference between revisions of "GlpK"

From SubtiWiki
Jump to: navigation, search
Line 40: Line 40:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
+
<br/><br/>
<br/><br/><br/><br/>
 
 
 
 
 
<br/><br/><br/><br/><br/><br/>
 
  
 
= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
Line 119: Line 115:
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=glpK_1003344_1004834_1 glpK] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=glpK_1003344_1004834_1 glpK] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]] {{PubMed|2127799}}
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|2127799}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 153: Line 149:
  
 
=References=
 
=References=
'''Additional publications:''' {{PubMed|20817675}}
+
<pubmed>1335945 9162046 11929549 7773413, 19102629 20817675</pubmed>
<pubmed>1335945 9162046 11929549 7773413, 19102629 </pubmed>
 
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:46, 18 June 2013

  • Description: glycerol kinase

Gene name glpK
Synonyms
Essential no
Product glycerol kinase
Function glycerol utilization
Gene expression levels in SubtiExpress: glpK
Interactions involving this protein in SubtInteract: GlpK
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 54 kDa, 4.985
Gene length, protein length 1488 bp, 496 aa
Immediate neighbours glpF, glpD
Sequences Protein DNA DNA_with_flanks
Genetic context
GlpK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GlpK expression.png















Categories containing this gene/protein

utilization of specific carbon sources, phosphoproteins

This gene is a member of the following regulons

AbrB regulon, CcpA regulon, GlpP regulon

The gene

Basic information

  • Locus tag: BSU09290

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + glycerol = ADP + sn-glycerol 3-phosphate (according to Swiss-Prot)
  • Protein family: FGGY kinase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3H46 (from Enterococcus casseliflavus, complex with glycerol) PubMed
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Josef Deutscher, Paris-Grignon, France

Your additional remarks

References