Difference between revisions of "SrfAD"

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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=srfAD_402388_403116_1 srfAD] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=srfAD_402388_403116_1 srfAD] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]] {{PubMed|1715856}}  
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* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|1715856}}  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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<pubmed>20735481 </pubmed>
 
<pubmed>20735481 </pubmed>
 
==Original publications==
 
==Original publications==
'''Additional publications:''' {{PubMed|22511326,20817675}}
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<pubmed>18704089,16166527,17227471, 17190806,8830686, 1715856 12642660 16091051 22511326,20817675</pubmed>
<pubmed>18704089,16166527,17227471, 17190806,8830686, 1715856 12642660 16091051 </pubmed>
 
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:27, 18 June 2013

  • Description: surfactin synthetase / competence

Gene name srfAD
Synonyms comL
Essential no
Product surfactin synthetase / competence
Function antibiotic synthesis
Gene expression levels in SubtiExpress: srfAD
MW, pI 27 kDa, 5.22
Gene length, protein length 726 bp, 242 aa
Immediate neighbours srfAC, ycxA
Sequences Protein DNA DNA_with_flanks
Genetic context
SrfAD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SrfAD expression.png















Categories containing this gene/protein

miscellaneous metabolic pathways, biosynthesis of antibacterial compounds

This gene is a member of the following regulons

Abh regulon, CodY regulon, ComA regulon, PerR regulon, Spx regulon

The gene

Basic information

  • Locus tag: BSU03520

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: thioesterase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
    • repressed during hydrogen peroxide stress (PerR) PubMed
    • expressed at high cell density (ComA) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Massimiliano Marvasi, Pieter T Visscher, Lilliam Casillas Martinez
Exopolymeric substances (EPS) from Bacillus subtilis: polymers and genes encoding their synthesis.
FEMS Microbiol Lett: 2010, 313(1);1-9
[PubMed:20735481] [WorldCat.org] [DOI] (I p)

Original publications