Difference between revisions of "YcbL"

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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU02550 ycbL]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU02550 ycbL]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YcbL YcbL]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=YcbL YcbL]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 25 kDa, 4.917   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 25 kDa, 4.917   

Revision as of 15:07, 11 November 2013

Gene name ycbL
Synonyms
Essential no
Product two-component response regulator
Function unknown
Gene expression levels in SubtiExpress: ycbL
Interactions involving this protein in SubtInteract: YcbL
MW, pI 25 kDa, 4.917
Gene length, protein length 678 bp, 226 aa
Immediate neighbours ycbK, ycbM
Sequences Protein DNA DNA_with_flanks
Genetic context
YcbL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YcbL expression.png


























Categories containing this gene/protein

transcription factors and their control, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU02550

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: OmpR family of two-component response regulators
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation by YcbM ( on an aspartate residue, putative)
  • Cofactor(s):
  • Effectors of protein activity: activity is controlled by YcbM-dependent phosphorylation (putative)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

C Fabret, V A Feher, J A Hoch
Two-component signal transduction in Bacillus subtilis: how one organism sees its world.
J Bacteriol: 1999, 181(7);1975-83
[PubMed:10094672] [WorldCat.org] [DOI] (P p)