Difference between revisions of "SigZ"
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| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sigZ_2742244_2742774_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:sigZ_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sigZ_2742244_2742774_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:sigZ_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU26840]] |
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Revision as of 14:02, 16 May 2013
- Description: RNA polymerase ECF-type sigma factor SigZ
| Gene name | sigZ |
| Synonyms | |
| Essential | no |
| Product | RNA polymerase ECF-type sigma factor SigZ |
| Function | transcription |
| Gene expression levels in SubtiExpress: sigZ | |
| Interactions involving this protein in SubtInteract: SigZ | |
| MW, pI | 20 kDa, 6.237 |
| Gene length, protein length | 528 bp, 176 aa |
| Immediate neighbours | zinT, yrpG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription, sigma factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU26840
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ECF subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O05409
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Yun Luo, Kei Asai, Yoshito Sadaie, John D Helmann
Transcriptomic and phenotypic characterization of a Bacillus subtilis strain without extracytoplasmic function σ factors.
J Bacteriol: 2010, 192(21);5736-45
[PubMed:20817771]
[WorldCat.org]
[DOI]
(I p)
Thorsten Mascher, Anna-Barbara Hachmann, John D Helmann
Regulatory overlap and functional redundancy among Bacillus subtilis extracytoplasmic function sigma factors.
J Bacteriol: 2007, 189(19);6919-27
[PubMed:17675383]
[WorldCat.org]
[DOI]
(P p)
