Difference between revisions of "YugT"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yugU]]'', ''[[yugS]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yugU]]'', ''[[yugS]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31290 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31290 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31290 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31290 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31290 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31290 DNA_with_flanks]
 
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Revision as of 11:07, 14 May 2013

  • Description: similar to exo-alpha-1,4-glucosidase

Gene name yugT
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yugT
MW, pI 63 kDa, 4.965
Gene length, protein length 1662 bp, 554 aa
Immediate neighbours yugU, yugS
Sequences Protein DNA DNA_with_flanks
Genetic context
YugT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YugT expression.png
























Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

Spx regulon

The gene

Basic information

  • Locus tag: BSU31290

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Hydrolysis of (1->6)-alpha-D-glucosidic linkages in some oligosaccharides produced from starch and glycogen by alpha-amylase, and in isomaltose (according to Swiss-Prot)
  • Protein family: glycosyl hydrolase 13 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Shunji Nakano, Michiko M Nakano, Ying Zhang, Montira Leelakriangsak, Peter Zuber
A regulatory protein that interferes with activator-stimulated transcription in bacteria.
Proc Natl Acad Sci U S A: 2003, 100(7);4233-8
[PubMed:12642660] [WorldCat.org] [DOI] (P p)

Bauke Oudega, Gregory Koningstein, Luísa Rodrigues, Maria de Sales Ramon, Helmut Hilbert, Andreas Düsterhöft, Thomas M Pohl, Thomas Weitzenegger
Analysis of the Bacillus subtilis genome: cloning and nucleotide sequence of a 62 kb region between 275 degrees (rrnB) and 284 degrees (pai).
Microbiology (Reading): 1997, 143 ( Pt 8);2769-2774
[PubMed:9274030] [WorldCat.org] [DOI] (P p)