Difference between revisions of "YtlD"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytlC]]'', ''[[mutTA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytlC]]'', ''[[mutTA]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30620 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30620 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30620 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30620 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30620 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30620 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ytlD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ytlD_context.gif]]

Revision as of 11:05, 14 May 2013

Gene name ytlD
Synonyms
Essential no
Product ABC transporter (permease)
Function unknown
Gene expression levels in SubtiExpress: ytlD
Interactions involving this protein in SubtInteract: YtlD
MW, pI 30 kDa, 9.774
Gene length, protein length 810 bp, 270 aa
Immediate neighbours ytlC, mutTA
Sequences Protein DNA DNA_with_flanks
Genetic context
YtlD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtlD expression.png
























Categories containing this gene/protein

ABC transporters, sporulation proteins, membrane proteins

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU30620

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: binding-protein-dependent transport system permease family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cell membrane PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References