Difference between revisions of "AmyX"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytmP]]'', ''[[ytlR]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytmP]]'', ''[[ytlR]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29930 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29930 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29930 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29930 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29930 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29930 DNA_with_flanks]
 
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Revision as of 11:02, 14 May 2013

  • Description: pullulanase (debranching enzyme)

Gene name amyX
Synonyms
Essential no
Product pullulanase
Function starch degradation
Gene expression levels in SubtiExpress: amyX
MW, pI 80 kDa, 5.799
Gene length, protein length 2154 bp, 718 aa
Immediate neighbours ytmP, ytlR
Sequences Protein DNA DNA_with_flanks
Genetic context
AmyX context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AmyX expression.png
























Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU29930

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): GlgB

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2E8Z (complex with alpha cyclodextrin), 2E9B (complex with maltose)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References