Difference between revisions of "YppE"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yppF]]'', ''[[yppD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yppF]]'', ''[[yppD]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22270 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22270 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22270 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22270 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22270 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22270 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yppE_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yppE_context.gif]]

Revision as of 10:32, 14 May 2013

  • Description: unknown

Gene name yppE
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yppE
MW, pI 14 kDa, 5.423
Gene length, protein length 369 bp, 123 aa
Immediate neighbours yppF, yppD
Sequences Protein DNA DNA_with_flanks
Genetic context
YppE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YppE expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

Spo0A regulon

The gene

Basic information

  • Locus tag: BSU22270

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • expressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Virginie Molle, Masaya Fujita, Shane T Jensen, Patrick Eichenberger, José E González-Pastor, Jun S Liu, Richard Losick
The Spo0A regulon of Bacillus subtilis.
Mol Microbiol: 2003, 50(5);1683-701
[PubMed:14651647] [WorldCat.org] [DOI] (P p)