Difference between revisions of "YngH"

From SubtiWiki
Jump to: navigation, search
Line 24: Line 24:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yngHB]]'', ''[[yngI]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yngHB]]'', ''[[yngI]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18240 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18240 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18240 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18240 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18240 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18240 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yngH_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yngH_context.gif]]

Revision as of 10:22, 14 May 2013

  • Description: methylcrotonoyl-CoA carboxylase

Gene name yngH
Synonyms accC
Essential no
Product methylcrotonoyl-CoA carboxylase, subunit
Function mother cell metabolism, leucine utilization
Gene expression levels in SubtiExpress: yngH
Interactions involving this protein in SubtInteract: YngH
MW, pI 48 kDa, 7.31
Gene length, protein length 1332 bp, 444 aa
Immediate neighbours yngHB, yngI
Sequences Protein DNA DNA_with_flanks
Genetic context
YngH context.gif
This image was kindly provided by SubtiList















Categories containing this gene/protein

utilization of amino acids, sporulation proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU18240

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein (according to Swiss-Prot)
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): biotin
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References