Difference between revisions of "YlmA"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigG]]'', ''[[ylmB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigG]]'', ''[[ylmB]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15340 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15340 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15340 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15340 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15340 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15340 DNA_with_flanks]
 
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Revision as of 10:10, 14 May 2013

Gene name ylmA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ylmA
MW, pI 29 kDa, 5.128
Gene length, protein length 792 bp, 264 aa
Immediate neighbours sigG, ylmB
Sequences Protein DNA DNA_with_flanks
Genetic context
YlmA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YlmA expression.png















Categories containing this gene/protein

ABC transporters

This gene is a member of the following regulons

CodY regulon

The gene

Basic information

  • Locus tag: BSU15340

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Boris R Belitsky, Abraham L Sonenshein
Genetic and biochemical analysis of CodY-binding sites in Bacillus subtilis.
J Bacteriol: 2008, 190(4);1224-36
[PubMed:18083814] [WorldCat.org] [DOI] (I p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)