Difference between revisions of "CtaF"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ctaE]]'', ''[[ctaG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ctaE]]'', ''[[ctaG]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU14920 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU14920 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU14920 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU14920 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU14920 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU14920 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ctaF_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ctaF_context.gif]]

Revision as of 10:07, 14 May 2013

  • Description: cytochrome-c oxidase (subunit IV)

Gene name ctaF
Synonyms
Essential no
Product cytochrome-c oxidase (subunit IV)
Function respiration
Gene expression levels in SubtiExpress: ctaF
MW, pI 12 kDa, 9.875
Gene length, protein length 330 bp, 110 aa
Immediate neighbours ctaE, ctaG
Sequences Protein DNA DNA_with_flanks
Genetic context
CtaF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CtaF expression.png
























Categories containing this gene/protein

respiration, membrane proteins

This gene is a member of the following regulons

Abh regulon, AbrB regulon, ResD regulon

The gene

Basic information

  • Locus tag: BSU14920

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O (according to Swiss-Prot)
  • Protein family: cytochrome c oxidase bacterial subunit 4 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • expressed under anaerobic conditions (ResD) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed