Difference between revisions of "YfiJ"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfiI]]'', ''[[yfiK]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfiI]]'', ''[[yfiK]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08290 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08290 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08290 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08290 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08290 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08290 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yfiJ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yfiJ_context.gif]]

Revision as of 09:44, 14 May 2013

Gene name yfiJ
Synonyms
Essential no
Product two-component sensor kinase
Function unknown
Gene expression levels in SubtiExpress: yfiJ
Interactions involving this protein in SubtInteract: YfiJ
MW, pI 44 kDa, 6.389
Gene length, protein length 1200 bp, 400 aa
Immediate neighbours yfiI, yfiK
Sequences Protein DNA DNA_with_flanks
Genetic context
YfiJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YfiJ expression.png
























Categories containing this gene/protein

protein modification, transcription factors and their control, membrane proteins, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU08290

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: autophosphorylation, phosphorylation of YfiK
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: 5 transmembrane segments
  • Modification: autophosphorylation on a His residue
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

C Fabret, V A Feher, J A Hoch
Two-component signal transduction in Bacillus subtilis: how one organism sees its world.
J Bacteriol: 1999, 181(7);1975-83
[PubMed:10094672] [WorldCat.org] [DOI] (P p)

H Yamamoto, S Uchiyama, J Sekiguchi
The Bacillus subtilis chromosome region near 78 degrees contains the genes encoding a new two-component system, three ABC transporters and a lipase.
Gene: 1996, 181(1-2);147-51
[PubMed:8973323] [WorldCat.org] [DOI] (P p)