Difference between revisions of "RsbV"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rsbU]]'', ''[[rsbW]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rsbU]]'', ''[[rsbW]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04710 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04710 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04710 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04710 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04710 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04710 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:rsbV_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:rsbV_context.gif]]

Revision as of 09:32, 14 May 2013


Gene name rsbV
Synonyms
Essential no
Product anti-anti-SigB
Function control of SigB activity
Gene expression levels in SubtiExpress: rsbV
Interactions involving this protein in SubtInteract: RsbV
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 11 kDa, 4.698
Gene length, protein length 327 bp, 109 aa
Immediate neighbours rsbU, rsbW
Sequences Protein DNA DNA_with_flanks
Genetic context
RsbV context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RsbV expression.png




























Categories containing this gene/protein

sigma factors and their control, general stress proteins (controlled by SigB), phosphoproteins

This gene is a member of the following regulons

CcpA regulon, SigB regulon

The gene

Basic information

  • Locus tag: BSU04710

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: STAS domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1VC1 (homolog from Thermotoga maritima)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
    • CcpA: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Locke JC, Young JW, Fontes M, Hernández Jiménez MJ, Elowitz MB  
Stochastic pulse regulation in bacterial stress response. 
Science. 2011 334:366-369. 
PubMed:21979936