Difference between revisions of "DctB"

From SubtiWiki
Jump to: navigation, search
Line 23: Line 23:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbD]]'', ''[[dctS]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbD]]'', ''[[dctS]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04440 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04440 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04440 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04440 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04440 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04440 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dctB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dctB_context.gif]]

Revision as of 09:30, 14 May 2013

  • Description: C4-dicarboxylate binding protein

Gene name dctB
Synonyms ydbE
Essential no
Product C4-dicarboxylate binding protein
Function uptake of C4-dicarboxylates
Gene expression levels in SubtiExpress: dctB
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 39 kDa, 4.889
Gene length, protein length 1050 bp, 350 aa
Immediate neighbours ydbD, dctS
Sequences Protein DNA DNA_with_flanks
Genetic context
DctB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
DctB expression.png




























Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU04440

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: bacterial solute-binding protein 7 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Kei Asai, Sang-Hoon Baik, Yasuhiro Kasahara, Shigeki Moriya, Naotake Ogasawara
Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis.
Microbiology (Reading): 2000, 146 ( Pt 2);263-271
[PubMed:10708364] [WorldCat.org] [DOI] (P p)