Difference between revisions of "OpuAB"

From SubtiWiki
Jump to: navigation, search
Line 26: Line 26:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[opuAA]]'', ''[[opuAC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[opuAA]]'', ''[[opuAC]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02990 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02990 DNA_with_flanks]
 
|-
 
|-
 
|-
 
|-

Revision as of 09:25, 14 May 2013

Gene name opuAB
Synonyms
Essential no
Product glycine betaine ABC transporter (permease)
Function compatible solute transport
Gene expression levels in SubtiExpress: opuAB
Interactions involving this protein in SubtInteract: OpuAB
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 30 kDa, 9.837
Gene length, protein length 846 bp, 282 aa
Immediate neighbours opuAA, opuAC
Sequences Protein DNA DNA_with_flanks
Genetic context
OpuAB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
OpuAB expression.png















Categories containing this gene/protein

ABC transporters, coping with hyper-osmotic stress, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU02990

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ABC transmembrane type-1 domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced by osmotic stress PubMed
    • repressed by intracellular glycine betaine PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Erhard Bremer, University of Marburg, Germany homepage

Your additional remarks

References