Difference between revisions of "YcdF"
Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rapJ]]'', ''[[ycdG]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rapJ]]'', ''[[ycdG]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02830 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02830 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ycdF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ycdF_context.gif]] |
Revision as of 09:24, 14 May 2013
- Description: general stress protein, similar to glucose 1-dehydrogenase, survival of ethanol stress and low temperatures
Gene name | ycdF |
Synonyms | |
Essential | no |
Product | unknown |
Function | survival of ethanol stress and low temperatures |
Gene expression levels in SubtiExpress: ycdF | |
MW, pI | 27 kDa, 5.738 |
Gene length, protein length | 774 bp, 258 aa |
Immediate neighbours | rapJ, ycdG |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB), poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02830
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H (according to Swiss-Prot)
- Protein family: short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P80869
- KEGG entry: [2]
- E.C. number: 1.1.1.47
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References