Difference between revisions of "GerBA"

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|style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] response to the combination of glucose, fructose, and KCl
 
|style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] response to the combination of glucose, fructose, and KCl
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU35800 gerBA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35800 gerBA]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GerBA GerBA]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/GerBA GerBA]
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pmi]]'', ''[[gerBB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pmi]]'', ''[[gerBB]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15597&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35800 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35800 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35800 Advanced_DNA]
 
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Revision as of 14:00, 13 May 2013

  • Description: nutrient receptor, germination response to the combination of glucose, fructose, and KCl

Gene name gerBA
Synonyms
Essential no
Product nutrient receptor
Function germination response to the combination of glucose, fructose, and KCl
Gene expression levels in SubtiExpress: gerBA
Interactions involving this protein in SubtInteract: GerBA
MW, pI 53 kDa, 7.295
Gene length, protein length 1446 bp, 482 aa
Immediate neighbours pmi, gerBB
Sequences Protein DNA Advanced_DNA
Genetic context
GerBA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GerBA expression.png















Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU35800

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: gerABKA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed