Difference between revisions of "RemB"
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of [[biofilm formation]] | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of [[biofilm formation]] | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU00050 remB] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 5 kDa, 8.796 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 5 kDa, 8.796 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[recF]]'', ''[[gyrB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[recF]]'', ''[[gyrB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00050 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00050 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00050 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:DnaA_dnaN_yaaA_recF_yaaB_gyrB_context.png]] | |colspan="2" | '''Genetic context''' <br/> [[Image:DnaA_dnaN_yaaA_recF_yaaB_gyrB_context.png]] | ||
Revision as of 11:52, 13 May 2013
- Description: involved in the activation of biofilm matrix biosynthetic operons, acts in parallel to SinR, AbrB, and DegU
| Gene name | remB |
| Synonyms | yaaB |
| Essential | no |
| Product | regulator of the extracellular matrix |
| Function | regulation of biofilm formation |
| Gene expression levels in SubtiExpress: remB | |
| MW, pI | 5 kDa, 8.796 |
| Gene length, protein length | 156 bp, 52 aa |
| Immediate neighbours | recF, gyrB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00050
Phenotypes of a mutant
- smooth colonies on MsGG medium, no biofilm formation PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P37525
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Daniel Kearns, Indiana University, Bloomington, USA, homepage
Your additional remarks
References
Additional publications: PubMed
