Difference between revisions of "YncF"
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|style="background:#ABCDEF;" align="center"|'''Function''' || nucleotide metabolism | |style="background:#ABCDEF;" align="center"|'''Function''' || nucleotide metabolism | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU17660 yncF] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 5.098 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 5.098 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yncE]]'', ''[[cotU]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yncE]]'', ''[[cotU]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU17660 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU17660 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU17660 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yncF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yncF_context.gif]] | ||
Revision as of 12:55, 13 May 2013
- Description: dUTP diphosphatase
| Gene name | yncF |
| Synonyms | |
| Essential | no |
| Product | dUTP diphosphatase |
| Function | nucleotide metabolism |
| Gene expression levels in SubtiExpress: yncF | |
| MW, pI | 16 kDa, 5.098 |
| Gene length, protein length | 432 bp, 144 aa |
| Immediate neighbours | yncE, cotU |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU17660
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): YosS
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: O31801
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Javier García-Nafría, Lynn Burchell, Mine Takezawa, Neil J Rzechorzek, Mark J Fogg, Keith S Wilson
The structure of the genomic Bacillus subtilis dUTPase: novel features in the Phe-lid.
Acta Crystallogr D Biol Crystallogr: 2010, 66(Pt 9);953-61
[PubMed:20823546]
[WorldCat.org]
[DOI]
(I p)
Gui Lan Li, Juan Wang, Lan Fen Li, Xiao Dong Su
Crystallization and preliminary X-ray analysis of three dUTPases from Gram-positive bacteria.
Acta Crystallogr Sect F Struct Biol Cryst Commun: 2009, 65(Pt 4);339-42
[PubMed:19342774]
[WorldCat.org]
[DOI]
(I p)
