Difference between revisions of "FliW"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[CsrA]] activity | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[CsrA]] activity | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35380 fliW] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/FliW FliW] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/FliW FliW] | ||
| Line 24: | Line 24: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[csrA]]'', ''[[yviE]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[csrA]]'', ''[[yviE]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35380 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35380 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35380 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yviF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yviF_context.gif]] | ||
Revision as of 13:59, 13 May 2013
| Gene name | fliW |
| Synonyms | yviF |
| Essential | no |
| Product | CsrA anatagonist |
| Function | control of CsrA activity |
| Gene expression levels in SubtiExpress: fliW | |
| Interactions involving this protein in SubtInteract: FliW | |
| MW, pI | 16 kDa, 4.338 |
| Gene length, protein length | 429 bp, 143 aa |
| Immediate neighbours | csrA, yviE |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35380
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: fliW family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P96503
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Additional Reviews: PubMed
Original Publications
Sampriti Mukherjee, Paul Babitzke, Daniel B Kearns
FliW and FliS function independently to control cytoplasmic flagellin levels in Bacillus subtilis.
J Bacteriol: 2013, 195(2);297-306
[PubMed:23144244]
[WorldCat.org]
[DOI]
(I p)
Sampriti Mukherjee, Helen Yakhnin, Dave Kysela, Josh Sokoloski, Paul Babitzke, Daniel B Kearns
CsrA-FliW interaction governs flagellin homeostasis and a checkpoint on flagellar morphogenesis in Bacillus subtilis.
Mol Microbiol: 2011, 82(2);447-61
[PubMed:21895793]
[WorldCat.org]
[DOI]
(I p)
Björn Titz, Seesandra V Rajagopala, Claudia Ester, Roman Häuser, Peter Uetz
Novel conserved assembly factor of the bacterial flagellum.
J Bacteriol: 2006, 188(21);7700-6
[PubMed:16936039]
[WorldCat.org]
[DOI]
(P p)
