Difference between revisions of "RpoY"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[RNA polymerase]] activity | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[RNA polymerase]] activity | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU14540 ykzG] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8 kDa, 4.605 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 8 kDa, 4.605 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rnjA]]'', ''[[ykrA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rnjA]]'', ''[[ykrA]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU14540 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU14540 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU14540 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ykzG_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ykzG_context.gif]] | ||
Revision as of 12:43, 13 May 2013
- Description: epsilon subunit of RNA polymerase
| Gene name | ykzG |
| Synonyms | |
| Essential | no |
| Product | epsilon subunit of RNA polymerase |
| Function | control of RNA polymerase activity |
| Gene expression levels in SubtiExpress: ykzG | |
| MW, pI | 8 kDa, 4.605 |
| Gene length, protein length | 207 bp, 69 aa |
| Immediate neighbours | rnjA, ykrA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU14540
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein is sometimes annotated as omega1 subunit of RNA polymerase, however, there is no experimental evidence in support of this ("it is unrelated in sequence to ω/Rpb6 from the eubacteria, archaea and eukaryotes, unpublished data suggests it does not bind at the same site as ω/Rpb6 subunits bind their cognate RNAPs, and therefore it is unlikely to function as a true ω subunit") PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: UPF0356 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O31718
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
