Difference between revisions of "GerPF"
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|style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] | |style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU10670 gerPF] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 3.621 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 3.621 | ||
| Line 21: | Line 21: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hlpB]]'', ''[[gerPE]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hlpB]]'', ''[[gerPE]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10670 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:gerPF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:gerPF_context.gif]] | ||
Revision as of 12:30, 13 May 2013
- Description: spore germination protein, facilitates access of nutrient germinants to their cognate germinant receptors in spores’ inner membrane
| Gene name | gerPF |
| Synonyms | yisC |
| Essential | no |
| Product | unknown |
| Function | germination |
| Gene expression levels in SubtiExpress: gerPF | |
| MW, pI | 7 kDa, 3.621 |
| Gene length, protein length | 225 bp, 75 aa |
| Immediate neighbours | hlpB, gerPE |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10670
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: gerPA/gerPF family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O06716
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
J Behravan, H Chirakkal, A Masson, A Moir
Mutations in the gerP locus of Bacillus subtilis and Bacillus cereus affect access of germinants to their targets in spores.
J Bacteriol: 2000, 182(7);1987-94
[PubMed:10715007]
[WorldCat.org]
[DOI]
(P p)
