Difference between revisions of "YkvU"

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|style="background:#ABCDEF;" align="center"|'''Function''' || germination at high pressure
 
|style="background:#ABCDEF;" align="center"|'''Function''' || germination at high pressure
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU13830 ykvU]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13830 ykvU]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 9.551   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 9.551   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykvT]]'', ''[[stoA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykvT]]'', ''[[stoA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13256&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13830 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ykvU_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ykvU_context.gif]]

Revision as of 12:40, 13 May 2013

  • Description: spore cortex membrane protein, required for germination at high pressure

Gene name ykvU
Synonyms
Essential no
Product spore cortex membrane protein
Function germination at high pressure
Gene expression levels in SubtiExpress: ykvU
MW, pI 49 kDa, 9.551
Gene length, protein length 1335 bp, 445 aa
Immediate neighbours ykvT, stoA
Sequences Protein DNA Advanced_DNA
Genetic context
YkvU context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkvU expression.png
























Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU13830

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References