Difference between revisions of "YfnH"

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(Database entries)
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU07270 yfnH]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07270 yfnH]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 5.485   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 5.485   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfnI]]'', ''[[yfnG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfnI]]'', ''[[yfnG]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12546&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07270 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07270 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07270 Advanced_DNA]
 
|-
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yfnH_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yfnH_context.gif]]

Revision as of 12:20, 13 May 2013

  • Description: similar to glucose-1-phosphate cytidylyltransferase

Gene name yfnH
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yfnH
MW, pI 28 kDa, 5.485
Gene length, protein length 762 bp, 254 aa
Immediate neighbours yfnI, yfnG
Sequences Protein DNA Advanced_DNA
Genetic context
YfnH context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YfnH expression.png
























Categories containing this gene/protein

sporulation proteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU07270

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation: expressed during sporulation (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836] [WorldCat.org] [DOI] (I p)