Difference between revisions of "CsoR"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of copper homeostasis | |style="background:#ABCDEF;" align="center"|'''Function''' || control of copper homeostasis | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33520 csoR] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://cellpublisher.gobics.de/view/GqbblRJkBH metal ion homeostasis]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://cellpublisher.gobics.de/view/GqbblRJkBH metal ion homeostasis]''' | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[copZ]]'', ''[[yvaA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[copZ]]'', ''[[yvaA]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33520 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33520 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33520 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:yvgZ_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yvgZ_context.gif]] | ||
Revision as of 13:51, 13 May 2013
| Gene name | csoR |
| Synonyms | yvgZ |
| Essential | no |
| Product | transcription repressor |
| Function | control of copper homeostasis |
| Gene expression levels in SubtiExpress: csoR | |
| Metabolic function and regulation of this protein in SubtiPathways: metal ion homeostasis | |
| MW, pI | 11 kDa, 7.299 |
| Gene length, protein length | 303 bp, 101 aa |
| Immediate neighbours | copZ, yvaA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
trace metal homeostasis (Cu, Zn, Ni, Mn, Mo), transcription factors and their control, resistance against toxic metals
This gene is a member of the following regulons
The CsoR regulon:
The gene
Basic information
- Locus tag: BSU33520
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: Cu(I) ions cause release of CsoR from its operator sites
Database entries
- Structure:
- UniProt: O32222
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
John Helmann, Cornell University, USA Homepage
Mohamed Marahiel, Marburg University, Germany homepage
Your additional remarks
References
Reviews
Corinna Rademacher, Bernd Masepohl
Copper-responsive gene regulation in bacteria.
Microbiology (Reading): 2012, 158(Pt 10);2451-2464
[PubMed:22918892]
[WorldCat.org]
[DOI]
(I p)
Original publications
