Difference between revisions of "CycB"
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|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of galactotriose | |style="background:#ABCDEF;" align="center"|'''Function''' || uptake of galactotriose | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34160 cycB] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CycB CycB] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CycB CycB] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ganP]]'', ''[[lacR]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ganP]]'', ''[[lacR]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34160 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34160 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34160 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:yvfK_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yvfK_context.gif]] | ||
Revision as of 13:53, 13 May 2013
- Description: galactotriose ABC transporter, binding protein
| Gene name | cycB |
| Synonyms | yvfK |
| Essential | no |
| Product | galactotriose ABC transporter, binding protein |
| Function | uptake of galactotriose |
| Gene expression levels in SubtiExpress: cycB | |
| Interactions involving this protein in SubtInteract: CycB | |
| MW, pI | 45 kDa, 5.441 |
| Gene length, protein length | 1263 bp, 421 aa |
| Immediate neighbours | ganP, lacR |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
ABC transporters, utilization of specific carbon sources, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34160
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: bacterial solute-binding protein 1 family (according to Swiss-Prot)
- Paralogous protein(s): MdxE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (via GanP-GanQ) PubMed
Database entries
- Structure:
- UniProt: O07009
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Yunrong Chai, Pascale B Beauregard, Hera Vlamakis, Richard Losick, Roberto Kolter
Galactose metabolism plays a crucial role in biofilm formation by Bacillus subtilis.
mBio: 2012, 3(4);e00184-12
[PubMed:22893383]
[WorldCat.org]
[DOI]
(I e)
A Kamionka, M K Dahl
Bacillus subtilis contains a cyclodextrin-binding protein which is part of a putative ABC-transporter.
FEMS Microbiol Lett: 2001, 204(1);55-60
[PubMed:11682178]
[WorldCat.org]
[DOI]
(P p)
Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453]
[WorldCat.org]
[DOI]
(P p)
R A Daniel, J Haiech, F Denizot, J Errington
Isolation and characterization of the lacA gene encoding beta-galactosidase in Bacillus subtilis and a regulator gene, lacR.
J Bacteriol: 1997, 179(17);5636-8
[PubMed:9287030]
[WorldCat.org]
[DOI]
(P p)
