Difference between revisions of "YetM"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU07230 yetM]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07230 yetM]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 40 kDa, 5.34   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 40 kDa, 5.34   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yetL]]'', ''[[yetN]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yetL]]'', ''[[yetN]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12542&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07230 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07230 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07230 Advanced_DNA]
 
|-
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yetM_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yetM_context.gif]]

Revision as of 12:20, 13 May 2013

  • Description: FAD-dependent monooxygenase

Gene name yetM
Synonyms
Essential no
Product FAD-dependent monooxygenase
Function unknown
Gene expression levels in SubtiExpress: yetM
MW, pI 40 kDa, 5.34
Gene length, protein length 1107 bp, 369 aa
Immediate neighbours yetL, yetN
Sequences Protein DNA Advanced_DNA
Genetic context
YetM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YetM expression.png
























Categories containing this gene/protein

resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)

This gene is a member of the following regulons

YetL regulon

The gene

Basic information

  • Locus tag: BSU07230

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: induced by flavonoids of kaempferol, apigenin, and luteolin (YetL)PubMed
  • Regulatory mechanism: YetL: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Kazutake Hirooka, Yusuke Danjo, Yuki Hanano, Satoshi Kunikane, Hiroshi Matsuoka, Shigeo Tojo, Yasutaro Fujita
Regulation of the Bacillus subtilis divergent yetL and yetM genes by a transcriptional repressor, YetL, in response to flavonoids.
J Bacteriol: 2009, 191(11);3685-97
[PubMed:19329649] [WorldCat.org] [DOI] (I p)