Difference between revisions of "Nap"

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|style="background:#ABCDEF;" align="center"|'''Function''' || lipid degradation  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || lipid degradation  
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU05440 nap]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU05440 nap]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 5.798   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 5.798   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydfJ]]'', ''[[ydfK]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydfJ]]'', ''[[ydfK]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12351&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU05440 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU05440 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU05440 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:nap_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:nap_context.gif]]

Revision as of 12:13, 13 May 2013

  • Description: carboxylesterase NA

Gene name nap
Synonyms cesA
Essential no
Product carboxylesterase NA
Function lipid degradation
Gene expression levels in SubtiExpress: nap
MW, pI 33 kDa, 5.798
Gene length, protein length 900 bp, 300 aa
Immediate neighbours ydfJ, ydfK
Sequences Protein DNA Advanced_DNA
Genetic context
Nap context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Nap expression.png
























Categories containing this gene/protein

utilization of lipids

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU05440

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: A carboxylic ester + H2O = an alcohol + a carboxylate (according to Swiss-Prot)
  • Protein family: AB hydrolase superfamily (according to Swiss-Prot)
  • Paralogous protein(s): YbfK

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Ken-ichi Yoshida, Hirotake Yamaguchi, Masaki Kinehara, Yo-hei Ohki, Yoshiko Nakaura, Yasutaro Fujita
Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box.
Mol Microbiol: 2003, 49(1);157-65
[PubMed:12823818] [WorldCat.org] [DOI] (P p)