Difference between revisions of "FbpB"
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|style="background:#ABCDEF;" align="center"|'''Function''' || RNA chaperone | |style="background:#ABCDEF;" align="center"|'''Function''' || RNA chaperone | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04530 fbpB] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 6 kDa, 9.9 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 6 kDa, 9.9 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbM]]'', ''[[fbpA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbM]]'', ''[[fbpA]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04530 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04530 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04530 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:FbpA_fbpB_context.jpeg]] | |colspan="2" | '''Genetic context''' <br/> [[Image:FbpA_fbpB_context.jpeg]] | ||
Revision as of 12:11, 13 May 2013
- Description: Fur-regulated basic protein, acts as RNA chaperone for fsrA, response to iron limitation
| Gene name | fbpB |
| Synonyms | ydbN |
| Essential | no |
| Product | Fur-regulated basic protein, acts as RNA chaperone for fsrA, response to iron limitation |
| Function | RNA chaperone |
| Gene expression levels in SubtiExpress: fbpB | |
| MW, pI | 6 kDa, 9.9 |
| Gene length, protein length | 177 bp, 59 aa |
| Immediate neighbours | ydbM, fbpA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
acquisition of iron, iron metabolism, RNA chaperones, short peptides
This gene is a member of the following regulons
The FbpB regulon: lutA-lutB-lutC
The gene
Basic information
- Locus tag: BSU04530
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The sequence of the former ydbN gene was corrected, and does now contain two genes, fbpA and fbpB. PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P96609
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Additional information:
- The mRNA has a long 5' leader region. This may indicate RNA-based regulation PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
