Difference between revisions of "PutR"
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of proline utilization | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of proline utilization | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03230 putR] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 47 kDa, 5.37 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 47 kDa, 5.37 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[putP]]'', ''[[ycgQ]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[putP]]'', ''[[ycgQ]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03230 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03230 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03230 Advanced_DNA] |
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Revision as of 12:06, 13 May 2013
| Gene name | putR |
| Synonyms | ycgP, prcR |
| Essential | no |
| Product | transcriptional activator (PucR family) |
| Function | regulation of proline utilization |
| Gene expression levels in SubtiExpress: putR | |
| MW, pI | 47 kDa, 5.37 |
| Gene length, protein length | 1233 bp, 411 aa |
| Immediate neighbours | putP, ycgQ |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transcription factors and their control, utilization of amino acids
This gene is a member of the following regulons
The PutR regulon:
The gene
Basic information
- Locus tag: BSU03230
Phenotypes of a mutant
- no growth with proline as single source of carbon or nitrogen PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcription activation of the proline utilization operon putB-putC-putP in the presence of proline PubMed
- Protein family: PucR family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): proline acts as co-activator PubMed
- Effectors of protein activity: proline activates PutR PubMed
Database entries
- Structure:
- UniProt: P94393
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation: constitutively expressed PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Boris R Belitsky
Indirect repression by Bacillus subtilis CodY via displacement of the activator of the proline utilization operon.
J Mol Biol: 2011, 413(2);321-36
[PubMed:21840319]
[WorldCat.org]
[DOI]
(I p)
