Difference between revisions of "OpuAA"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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=== Additional information=== | === Additional information=== | ||
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[opuAA]]-[[opuAB]]-[[opuAC]]'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuAA_321013_322269_1 opuAA] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuAA_321013_322269_1 opuAA] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|23175650}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** induced by osmotic stress {{PubMed|23175650}} | ||
| + | ** repressed by intracellular glycine betaine {{PubMed|23175650}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
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=References= | =References= | ||
| − | <pubmed>7622480,10092453,16645306,14623183,18321243,16225868, 21296969 </pubmed> | + | <pubmed>7622480,10092453,16645306,14623183,18321243,16225868, 21296969 22383849 23175650</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:23, 26 November 2012
- Description: glycine betaine ABC transporter (ATP-binding protein)
| Gene name | opuAA |
| Synonyms | |
| Essential | no |
| Product | glycine betaine ABC transporter (ATP-binding protein) |
| Function | compatible solute transport |
| Gene expression levels in SubtiExpress: opuAA | |
| Interactions involving this protein in SubtInteract: OpuAA | |
| Metabolic function and regulation of this protein in SubtiPathways: Stress | |
| MW, pI | 46 kDa, 5.107 |
| Gene length, protein length | 1254 bp, 418 aa |
| Immediate neighbours | yceK, opuAB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
ABC transporters, coping with hyper-osmotic stress, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02980
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + H2O + quaternary amine(Out) = ADP + phosphate + quaternary amine(In) (according to Swiss-Prot)
- Protein family: ABC transporter domain (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: associated to the membrane (via OpuAB) PubMed
Database entries
- Structure:
- UniProt: P46920
- KEGG entry: [2]
- E.C. number: 3.6.3.32
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Erhard Bremer, University of Marburg, Germany homepage
Your additional remarks
References
