Difference between revisions of "YcbG"
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of glucarate/galactarate utilization | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of glucarate/galactarate utilization | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU02500 ycbG] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 26 kDa, 5.993 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 26 kDa, 5.993 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycbF]]'', ''[[ycbH]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycbF]]'', ''[[ycbH]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02500 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02500 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02500 Advanced_DNA] |
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Revision as of 12:03, 13 May 2013
- Description: transcription regulator of the glucarate/galactarate utilization operon (GntR family)
| Gene name | ycbG |
| Synonyms | |
| Essential | no |
| Product | transcription regulator (GntR family) |
| Function | regulation of glucarate/galactarate utilization |
| Gene expression levels in SubtiExpress: ycbG | |
| MW, pI | 26 kDa, 5.993 |
| Gene length, protein length | 699 bp, 233 aa |
| Immediate neighbours | ycbF, ycbH |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of specific carbon sources, transcription factors and their control
This gene is a member of the following regulons
The YcbG regulon:
The gene
Basic information
- Locus tag: BSU02500
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P42239
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Shigeo Hosoya, Kunio Yamane, Michio Takeuchi, Tsutomu Sato
Identification and characterization of the Bacillus subtilis D-glucarate/galactarate utilization operon ycbCDEFGHJ.
FEMS Microbiol Lett: 2002, 210(2);193-9
[PubMed:12044674]
[WorldCat.org]
[DOI]
(P p)
