Difference between revisions of "YbfK"
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|style="background:#ABCDEF;" align="center"|'''Function''' || degradation of isoprenoid-containing lipids | |style="background:#ABCDEF;" align="center"|'''Function''' || degradation of isoprenoid-containing lipids | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU02260 ybfK] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 5.135 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 5.135 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ybfJ]]'', ''[[pssA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ybfJ]]'', ''[[pssA]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02260 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02260 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02260 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ybfK_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ybfK_context.gif]] | ||
Revision as of 12:02, 13 May 2013
- Description: carboxylesterase NP
| Gene name | ybfK |
| Synonyms | cesB |
| Essential | no |
| Product | carboxylesterase NP |
| Function | degradation of isoprenoid-containing lipids |
| Gene expression levels in SubtiExpress: ybfK | |
| MW, pI | 32 kDa, 5.135 |
| Gene length, protein length | 888 bp, 296 aa |
| Immediate neighbours | ybfJ, pssA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02260
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: A carboxylic ester + H2O = an alcohol + a carboxylate (according to Swiss-Prot)
- Protein family: AB hydrolase superfamily (according to Swiss-Prot)
- Paralogous protein(s): Nap
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- UniProt: O31452
- KEGG entry: [2]
- E.C. number: 3.1.1.1
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
M J Dröge, R Bos, W J Quax
Paralogous gene analysis reveals a highly enantioselective 1,2-O-isopropylideneglycerol caprylate esterase of Bacillus subtilis.
Eur J Biochem: 2001, 268(11);3332-8
[PubMed:11389736]
[WorldCat.org]
[DOI]
(P p)
