Difference between revisions of "RpsL"

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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''strA, fun ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''strA, fun ''
 
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes {{PubMed|23002217,12682299}}
 
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|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] S12 (BS12)
 
|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] S12 (BS12)
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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
  
essential [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
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essential {{PubMed|23002217,12682299}}
  
 
=== Database entries ===
 
=== Database entries ===
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=References=
 
=References=
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'''Additional publications:''' {{PubMed|23002217}}
 
<pubmed> 19653700 11489846 16391027 22517742</pubmed>
 
<pubmed> 19653700 11489846 16391027 22517742</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 11:35, 26 September 2012

Gene name rpsL
Synonyms strA, fun
Essential yes PubMed
Product ribosomal protein S12 (BS12)
Function translation
Gene expression levels in SubtiExpress: rpsL
Interactions involving this protein in SubtInteract: RpsL
MW, pI 15 kDa, 11.721
Gene length, protein length 414 bp, 138 aa
Immediate neighbours ybxF, rpsG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RpsL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpsL expression.png















Categories containing this gene/protein

translation, essential genes, phosphoproteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU01100

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-123 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed