Difference between revisions of "YvcA"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || complex colony development | |style="background:#ABCDEF;" align="center"|'''Function''' || complex colony development | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34850 yvcA] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 6.834 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 6.834 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvcB]]'', ''[[hisI]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvcB]]'', ''[[hisI]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34850 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34850 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34850 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yvcA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yvcA_context.gif]] | ||
Revision as of 13:56, 13 May 2013
- Description: required for complex colony development
| Gene name | yvcA |
| Synonyms | |
| Essential | no |
| Product | lipoprotein |
| Function | complex colony development |
| Gene expression levels in SubtiExpress: yvcA | |
| MW, pI | 27 kDa, 6.834 |
| Gene length, protein length | 723 bp, 241 aa |
| Immediate neighbours | yvcB, hisI |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
biofilm formation, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34850
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O06965
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Daniel T Verhamme, Ewan J Murray, Nicola R Stanley-Wall
DegU and Spo0A jointly control transcription of two loci required for complex colony development by Bacillus subtilis.
J Bacteriol: 2009, 191(1);100-8
[PubMed:18978066]
[WorldCat.org]
[DOI]
(I p)
Daniël T Verhamme, Taryn B Kiley, Nicola R Stanley-Wall
DegU co-ordinates multicellular behaviour exhibited by Bacillus subtilis.
Mol Microbiol: 2007, 65(2);554-68
[PubMed:17590234]
[WorldCat.org]
[DOI]
(P p)
