Difference between revisions of "YvqK"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU33150 yvqK]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33150 yvqK]
 
|-
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 21 kDa, 5.206   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 21 kDa, 5.206   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvqJ]]'', ''[[yvrA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvqJ]]'', ''[[yvrA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15305&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33150 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33150 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33150 Advanced_DNA]
 
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Revision as of 13:49, 13 May 2013

  • Description: ATP:cob(I)alamin adenosyltransferase

Gene name yvqK
Synonyms
Essential no
Product ATP:cob(I)alamin adenosyltransferase
Function unknown
Gene expression levels in SubtiExpress: yvqK
MW, pI 21 kDa, 5.206
Gene length, protein length 579 bp, 193 aa
Immediate neighbours yvqJ, yvrA
Sequences Protein DNA Advanced_DNA
Genetic context
YvqK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YvqK expression.png


























Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU33150

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + cob(I)yrinic acid a,c-diamide = triphosphate + adenosylcob(III)yrinic acid a,c-diamide (according to Swiss-Prot)
  • Protein family: Cob(I)alamin adenosyltransferase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Farhad Forouhar, Alexandre Kuzin, Jayaraman Seetharaman, Insun Lee, Weihong Zhou, Mariam Abashidze, Yang Chen, Wei Yong, Haleema Janjua, Yingyi Fang, Dongyan Wang, Kellie Cunningham, Rong Xiao, Thomas B Acton, Eran Pichersky, Daniel F Klessig, Carl W Porter, Gaetano T Montelione, Liang Tong
Functional insights from structural genomics.
J Struct Funct Genomics: 2007, 8(2-3);37-44
[PubMed:17588214] [WorldCat.org] [DOI] (P p)