Difference between revisions of "YtrE"

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** expressed early in the stationary phase  {{PubMed|10986249}}  
 
** expressed early in the stationary phase  {{PubMed|10986249}}  
 
** induced by cold shock (6-fold) {{PubMed|12399512}}
 
** induced by cold shock (6-fold) {{PubMed|12399512}}
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** induced by antibiotics interfering with membrane-bound steps of cell wall biosynthesis {{PubMed|22926563}}
  
 
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* '''Regulatory mechanism:'''  
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=References=
 
=References=
 
'''Additional publications:''' {{PubMed|21856850}}
 
'''Additional publications:''' {{PubMed|21856850}}
<pubmed>10986249,10092453, 12399512</pubmed>
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<pubmed>10986249,10092453, 12399512 22926563 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 08:24, 29 August 2012

Gene name ytrE
Synonyms
Essential no
Product ABC transporter (ATP-binding protein)
Function unknown
Gene expression levels in SubtiExpress: ytrE
Interactions involving this protein in SubtInteract: YtrE
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 25 kDa, 5.98
Gene length, protein length 693 bp, 231 aa
Immediate neighbours ytrF, ytrD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtrE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtrE expression.png



















Categories containing this gene/protein

ABC transporters, cold stress proteins, membrane proteins

This gene is a member of the following regulons

YtrA regulon

The gene

Basic information

  • Locus tag: BSU30420

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced by ramoplanin (YtrA) PubMed
    • expressed early in the stationary phase PubMed
    • induced by cold shock (6-fold) PubMed
    • induced by antibiotics interfering with membrane-bound steps of cell wall biosynthesis PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed