Difference between revisions of "IlvB"

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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
** glucose regulation: [[CcpA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/12193635 PubMed]
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** [[CcpA]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/12193635 PubMed]
 
** repression by BCAA: tRNA-controlled [[RNA switch]] ([[T-box]]) that mediates termination/antitermination  
 
** repression by BCAA: tRNA-controlled [[RNA switch]] ([[T-box]]) that mediates termination/antitermination  
 
** [[TnrA]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/15547269 PubMed]
 
** [[TnrA]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/15547269 PubMed]
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=References=
 
=References=
 
'''Additional publications:''' {{PubMed|21303765}}
 
'''Additional publications:''' {{PubMed|21303765}}
<pubmed>15060025,19258532,8289305,17488331,18083814,18641142,15547269,12618455,,15547269,12618455,12107147 1577690 12193635 15916605 15916606 15547269, 20935095 22517742</pubmed>
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<pubmed>15060025,19258532,8289305,17488331,18083814,18641142,15547269,12618455,,15547269,12618455,12107147 1577690 12193635 15916605 15916606 15547269, 20935095 22517742 22900538 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 16:36, 21 August 2012

  • Description: acetolactate synthase (large subunit)

Gene name ilvB
Synonyms
Essential no
Product acetolactate synthase (large subunit)
Function biosynthesis of branched-chain amino acids
Gene expression levels in SubtiExpress: ilvB
Metabolic function and regulation of this protein in SubtiPathways:
Ile, Leu, Val, Coenzyme A
MW, pI 62 kDa, 5.178
Gene length, protein length 1722 bp, 574 aa
Immediate neighbours ilvH, ysnD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
IlvB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
IlvB expression.png



















The gene

Basic information

  • Locus tag: BSU28310

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

Categories containing this gene/protein

biosynthesis/ acquisition of amino acids, phosphoproteins

This gene is a member of the following regulons

CodY regulon, CcpA regulon, TnrA regulon, T-box

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 2 pyruvate = 2-acetolactate + CO2 (according to Swiss-Prot)
  • Protein family: TPP enzyme family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-297 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1N53 (T box RNA)
  • KEGG entry: [3]

Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation PubMed

Expression and regulation

  • Regulation: for a complete overview on the regulation of the ilv operon, see Brinsmade et al.
    • expression is stimulated in the presence of glucose (CcpA) PubMed
    • repressed under nitrogen limiting conditions (glutamine or ammonium) (TnrA) PubMed
    • repressed by casamino acids PubMed
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed

Biological materials

  • Mutant: GP324, ilvB under control of pXyl (cat), available in Jörg Stülke lab
  • Expression vector:
  • lacZ fusion: pGP520 and pGP524 (both in pAC5), available in Stülke lab; pGP523 (in pAC6), available in Stülke lab
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed