Difference between revisions of "TrkA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to toxic metal ions | |style="background:#ABCDEF;" align="center"|'''Function''' || resistance to toxic metal ions | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU26640 trkA] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 38 kDa, 9.826 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 38 kDa, 9.826 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrdQ]]'', ''[[czcD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrdQ]]'', ''[[czcD]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU26640 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU26640 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU26640 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:trkA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:trkA_context.gif]] | ||
Revision as of 13:24, 13 May 2013
- Description: cation export
| Gene name | trkA |
| Synonyms | yrdP |
| Essential | no |
| Product | cation exporter |
| Function | resistance to toxic metal ions |
| Gene expression levels in SubtiExpress: trkA | |
| MW, pI | 38 kDa, 9.826 |
| Gene length, protein length | 1035 bp, 345 aa |
| Immediate neighbours | yrdQ, czcD |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transporters/ other, trace metal homeostasis (Cu, Zn, Ni, Mn, Mo), resistance against toxic metals
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU26640
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O07085
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Charles M Moore, Ahmed Gaballa, Monica Hui, Rick W Ye, John D Helmann
Genetic and physiological responses of Bacillus subtilis to metal ion stress.
Mol Microbiol: 2005, 57(1);27-40
[PubMed:15948947]
[WorldCat.org]
[DOI]
(P p)
