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| − | | + | SNsopd <a href="http://ohifoairszfj.com/">ohifoairszfj</a>, [url=http://qwuwzotzbdmt.com/]qwuwzotzbdmt[/url], [link=http://jztsqfdvnvva.com/]jztsqfdvnvva[/link], http://aowtuvrqsbfy.com/ |
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| − | {| align="right" border="1" cellpadding="2"
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| − | |-
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| − | |style="background:#ABCDEF;" align="center"|'''Gene name'''
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| − | |''ydaP''
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| − | |-
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| − | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
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| − | |-
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| − | |style="background:#ABCDEF;" align="center"| '''Essential''' || no
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| − | |-
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || putative glyoxalate carboligase
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| − | |-
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| − | |style="background:#ABCDEF;" align="center"|'''Function''' || utilization of glycolate and glyoxylate
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| − | |-
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU04340 ydaP]
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| − | |-
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| − | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 62 kDa, 5.217
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| − | |-
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| − | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1722 bp, 574 aa
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| − | |-
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| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mutT]]'', ''[[ydzK]]''
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| − | |-
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| − | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB12241]+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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| − | |-
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| − | |colspan="2" | '''Genetic context''' <br/> [[Image:ydaP_context.gif]]
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| − | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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| − | |-
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| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydaP_488830_490554_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:ydaP_expression.png|500px]]
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| − | |-
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| − | |}
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| − | | |
| − | __TOC__
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| − | <br/><br/><br/><br/>
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| − | <br/><br/><br/><br/>
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| − | <br/><br/><br/><br/>
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| − | <br/><br/><br/><br/>
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| − | <br/><br/><br/><br/>
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| − | | |
| − | <br/><br/>
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| − | | |
| − | = [[Categories]] containing this gene/protein =
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| − | {{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}},
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| − | {{SubtiWiki category|[[poorly characterized/ putative enzymes]]}}
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| − | | |
| − | = This gene is a member of the following [[regulons]] = | |
| − | {{SubtiWiki regulon|[[SigB regulon]]}}
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| − | | |
| − | =The gene=
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| − | | |
| − | === Basic information ===
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| − | | |
| − | * '''Locus tag:''' BSU04340
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| − | | |
| − | ===Phenotypes of a mutant ===
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| − | | |
| − | === Database entries ===
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| − | | |
| − | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ydaP.html]
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| − | | |
| − | * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12063]
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| − | | |
| − | === Additional information===
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| − | | |
| − | | |
| − | | |
| − | | |
| − | =The protein=
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| − | | |
| − | === Basic information/ Evolution ===
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| − | | |
| − | * '''Catalyzed reaction/ biological activity:'''
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| − | | |
| − | * '''Protein family:'''
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| − | | |
| − | * '''Paralogous protein(s):'''
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| − | | |
| − | === Extended information on the protein ===
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| − | | |
| − | * '''Kinetic information:'''
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| − | | |
| − | * '''Domains:'''
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| − | | |
| − | * '''Modification:'''
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| − | | |
| − | * '''Cofactor(s):'''
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| − | | |
| − | * '''Effectors of protein activity:'''
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| − | | |
| − | * '''[[SubtInteract|Interactions]]:'''
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| − | | |
| − | * '''[[Localization]]:'''
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| − | | |
| − | === Database entries ===
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| − | | |
| − | * '''Structure:'''
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| − | | |
| − | * '''UniProt:''' [http://www.uniprot.org/uniprot/P96591 P96591]
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| − | | |
| − | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU04340]
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| − | | |
| − | * '''E.C. number:'''
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| − | | |
| − | === Additional information===
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| − | | |
| − | =Expression and regulation=
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| − | | |
| − | * '''Operon:''' ''ydaP'' {{PubMed|10220166}}
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| − | | |
| − | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydaP_488830_490554_1 ydaP] {{PubMed|22383849}}
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| − | | |
| − | * '''Sigma factor:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]
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| − | | |
| − | * '''Regulation:''' induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed]
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| − | | |
| − | * '''Regulatory mechanism:'''
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| − | | |
| − | * '''Additional information:'''
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| − | | |
| − | =Biological materials =
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| − | | |
| − | * '''Mutant:''' GP457 (spc), available in [[Stülke]] lab
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| − | | |
| − | * '''Expression vector:'''
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| − |
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| − | * '''lacZ fusion:'''
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| − | | |
| − | * '''GFP fusion:'''
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| − | | |
| − | * '''two-hybrid system:'''
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| − | | |
| − | * '''Antibody:'''
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| − | | |
| − | =Labs working on this gene/protein=
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| − | | |
| − | =Your additional remarks=
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| − | | |
| − | =References=
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| − | | |
| − | <pubmed>10220166,,15805528, </pubmed>
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| − | | |
| − | [[Category:Protein-coding genes]]
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