Difference between revisions of "SqhC"
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|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of sporulenes | |style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of sporulenes | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU19320 sqhC] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 71 kDa, 7.633 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 71 kDa, 7.633 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dhaS]]'', ''[[sodF]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dhaS]]'', ''[[sodF]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19320 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19320 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19320 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:sqhC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:sqhC_context.gif]] | ||
Revision as of 13:00, 13 May 2013
- Description: squalene-hopene cyclase, biosynthesis of sporulenes, protection of the spore against oxidative stress PubMed
| Gene name | sqhC |
| Synonyms | |
| Essential | no |
| Product | squalene-hopene cyclase |
| Function | biosynthesis of sporulenes |
| Gene expression levels in SubtiExpress: sqhC | |
| MW, pI | 71 kDa, 7.633 |
| Gene length, protein length | 1896 bp, 632 aa |
| Immediate neighbours | dhaS, sodF |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
sporulation proteins, resistance against oxidative and electrophile stress
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU19320
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Squalene = hop-22(29)-ene (according to Swiss-Prot) production of sporulenes, polycyclic terpenoid lipids PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: surrounds the forespores PubMed
Database entries
- Structure:
- UniProt: Q796C3
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation: expressed during sporulation in the mother cell PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
T Bosak, R M Losick, A Pearson
A polycyclic terpenoid that alleviates oxidative stress.
Proc Natl Acad Sci U S A: 2008, 105(18);6725-9
[PubMed:18436644]
[WorldCat.org]
[DOI]
(I p)
