Difference between revisions of "Pps"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU18830 pps] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 96 kDa, 5.292 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 96 kDa, 5.292 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yobB]]'', ''[[xynA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yobB]]'', ''[[xynA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18830 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:pps_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:pps_context.gif]] | ||
Revision as of 12:59, 13 May 2013
- Description: similar to phosphoenolpyruvate synthase
| Gene name | pps |
| Synonyms | |
| Essential | no |
| Product | similar to phosphoenolpyruvate synthase |
| Function | unknown |
| Gene expression levels in SubtiExpress: pps | |
| MW, pI | 96 kDa, 5.292 |
| Gene length, protein length | 2598 bp, 866 aa |
| Immediate neighbours | yobB, xynA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18830
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): YvkC
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O34309
- KEGG entry: [2]
- E.C. number:
Additional information
The gene is annotated in KEGG and MetaCyc as phosphoenolpyruvate synthase EC 2.7.9.2. In Swiss-Prot the protein is described as “phosphoenolpyruvate synthase”. No literature/experimental evidence supporting the annotation is available. PubMed
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796]
[WorldCat.org]
[DOI]
(I p)
Tzu-Lin Hsiao, Olga Revelles, Lifeng Chen, Uwe Sauer, Dennis Vitkup
Automatic policing of biochemical annotations using genomic correlations.
Nat Chem Biol: 2010, 6(1);34-40
[PubMed:19935659]
[WorldCat.org]
[DOI]
(I p)
