Difference between revisions of "YofA"
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* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| − | * '''[[Localization]]:''' secreted (according to Swiss-Prot) | + | * '''[[Localization]]:''' |
| + | ** secreted (according to Swiss-Prot) | ||
=== Database entries === | === Database entries === | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ftsR_2006541_2007398_-1 yofA] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ftsR_2006541_2007398_-1 yofA] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 19:12, 25 March 2013
- Description: transcriptional activator of ftsW at the onset of stationary phase
| Gene name | yofA |
| Synonyms | ftsR |
| Essential | no |
| Product | transcriptional activator (LysR family) |
| Function | control of ftsW expression |
| Gene expression levels in SubtiExpress: yofA | |
| MW, pI | 31 kDa, 6.164 |
| Gene length, protein length | 855 bp, 285 aa |
| Immediate neighbours | ggt, yogA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription factors and their control
This gene is a member of the following regulons
The YofA regulon:
The gene
Basic information
- Locus tag: BSU18420
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LysR family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- secreted (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O34685
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- maximally expressed at the onset of stationary phase PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
