Difference between revisions of "YlaN"

From SubtiWiki
Jump to: navigation, search
Line 35: Line 35:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
Line 97: Line 93:
 
=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=2ODM 2ODM] {{PubMed|17469204}}
  
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/O07638 O07638]
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/O07638 O07638]
Line 109: Line 105:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[ylaN]]'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylaN_1552412_1552693_1 ylaN] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylaN_1552412_1552693_1 ylaN] {{PubMed|22383849}}
Line 141: Line 137:
 
=References=
 
=References=
  
<pubmed>17005971</pubmed>
+
<pubmed>17005971 17469204 22383849 22383849</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 13:07, 17 October 2012

  • Description: unknown

Gene name ylaN
Synonyms
Essential yes PubMed
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ylaN
MW, pI 10 kDa, 4.615
Gene length, protein length 279 bp, 93 aa
Immediate neighbours ylaM, ftsW
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YlaN context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YlaN expression.png















Categories containing this gene/protein

essential genes, proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU14840

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0358 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References