Difference between revisions of "YhdF"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
 
+
* '''Description:''' similar to glucose 1-dehydrogenase <br/><br/>
 
 
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
 
|-
 
|-

Revision as of 10:40, 10 August 2012

  • Description: similar to glucose 1-dehydrogenase

Gene name yhdF
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yhdF
MW, pI 31 kDa, 5.161
Gene length, protein length 867 bp, 289 aa
Immediate neighbours citA, bcaP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YhdF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YhdF expression.png
























Categories containing this gene/protein

general stress proteins (controlled by SigB), poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU09450

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ydhF (according to DBTBS)
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References